climada.hazard package¶
climada.hazard.base module¶
-
class
climada.hazard.base.Hazard(haz_type='', pool=None)[source]¶ Bases:
objectContains events of some hazard type defined at centroids. Loads from files with format defined in FILE_EXT.
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tag¶ information about the source
- Type
TagHazard
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units¶ units of the intensity
- Type
str
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event_id¶ id (>0) of each event
- Type
np.array
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event_name¶ name of each event (default: event_id)
- Type
list(str)
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date¶ integer date corresponding to the proleptic Gregorian ordinal, where January 1 of year 1 has ordinal 1 (ordinal format of datetime library)
- Type
np.array
-
orig¶ flags indicating historical events (True) or probabilistic (False)
- Type
np.array
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frequency¶ frequency of each event in years
- Type
np.array
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intensity¶ intensity of the events at centroids
- Type
sparse.csr_matrix
-
fraction¶ fraction of affected exposures for each event at each centroid
- Type
sparse.csr_matrix
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intensity_thres= 10¶ Intensity threshold per hazard used to filter lower intensities. To be set for every hazard type
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vars_oblig= {'centroids', 'event_id', 'fraction', 'frequency', 'intensity', 'tag', 'units'}¶ scalar, str, list, 1dim np.array of size num_events, scipy.sparse matrix of shape num_events x num_centroids, Centroids and Tag.
- Type
Name of the variables needed to compute the impact. Types
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vars_def= {'date', 'event_name', 'orig'}¶ Name of the variables used in impact calculation whose value is descriptive and can therefore be set with default values. Types: scalar, string, list, 1dim np.array of size num_events.
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vars_opt= {}¶ Name of the variables that aren’t need to compute the impact. Types: scalar, string, list, 1dim np.array of size num_events.
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__init__(haz_type='', pool=None)[source]¶ Initialize values.
- Parameters
haz_type (str, optional) – acronym of the hazard type (e.g. ‘TC’).
Examples
Fill hazard values by hand:
>>> haz = Hazard('TC') >>> haz.intensity = sparse.csr_matrix(np.zeros((2, 2))) >>> ...
Take hazard values from file:
>>> haz = Hazard('TC', HAZ_DEMO_MAT) >>> haz.read_mat(HAZ_DEMO_MAT, 'demo')
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set_raster(files_intensity, files_fraction=None, attrs=None, band=None, src_crs=None, window=False, geometry=False, dst_crs=False, transform=None, width=None, height=None, resampling=<Resampling.nearest: 0>)[source]¶ Append intensity and fraction from raster file. 0s put to the masked values. File can be partially read using window OR geometry. Alternatively, CRS and/or transformation can be set using dst_crs and/or (transform, width and height).
- Parameters
files_intensity (list(str)) – file names containing intensity
files_fraction (list(str)) – file names containing fraction
attrs (dict, optional) – name of Hazard attributes and their values
band (list(int), optional) – bands to read (starting at 1), default [1]
src_crs (crs, optional) – source CRS. Provide it if error without it.
window (rasterio.windows.Windows, optional) – window where data is extracted
geometry (shapely.geometry, optional) – consider pixels only in shape
dst_crs (crs, optional) – reproject to given crs
transform (rasterio.Affine) – affine transformation to apply
wdith (float) – number of lons for transform
height (float) – number of lats for transform
resampling (rasterio.warp,.Resampling optional) – resampling function used for reprojection to dst_crs
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set_vector(files_intensity, files_fraction=None, attrs=None, inten_name=None, frac_name=None, dst_crs=None)[source]¶ Read vector files format supported by fiona. Each intensity name is considered an event.
- Parameters
files_intensity (list(str)) – file names containing intensity, default: [‘intensity’]
files_fraction (list(str)) – file names containing fraction, default: [‘fraction’]
attrs (dict, optional) – name of Hazard attributes and their values
inten_name (list(str), optional) – name of variables containing the intensities of each event
frac_name (list(str), optional) – name of variables containing the fractions of each event
dst_crs (crs, optional) – reproject to given crs
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reproject_raster(dst_crs=False, transform=None, width=None, height=None, resampl_inten=<Resampling.nearest: 0>, resampl_fract=<Resampling.nearest: 0>)[source]¶ Change current raster data to other CRS and/or transformation
- Parameters
dst_crs (crs, optional) – reproject to given crs
transform (rasterio.Affine) – affine transformation to apply
wdith (float) – number of lons for transform
height (float) – number of lats for transform
resampl_inten (rasterio.warp,.Resampling optional) – resampling function used for reprojection to dst_crs for intensity
resampl_fract (rasterio.warp,.Resampling optional) – resampling function used for reprojection to dst_crs for fraction
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reproject_vector(dst_crs, scheduler=None)[source]¶ Change current point data to a a given projection
- Parameters
dst_crs (crs) – reproject to given crs
scheduler (str, optional) – used for dask map_partitions. “threads”, “synchronous” or “processes”
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vector_to_raster(scheduler=None)[source]¶ Change current point data to a raster with same resolution
- Parameters
scheduler (str, optional) – used for dask map_partitions. “threads”, “synchronous” or “processes”
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read_mat(file_name, description='', var_names=None)[source]¶ Read climada hazard generate with the MATLAB code.
- Parameters
file_name (str) – absolute file name
description (str, optional) – description of the data
var_names (dict, default) – name of the variables in the file, default: DEF_VAR_MAT constant
- Raises
KeyError –
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read_excel(file_name, description='', var_names=None)[source]¶ Read climada hazard generate with the MATLAB code.
- Parameters
file_name (str) – absolute file name
description (str, optional) – description of the data
centroids (Centroids, optional) – provide centroids if not contained in the file
var_names (dict, default) – name of the variables in the file, default: DEF_VAR_EXCEL constant
- Raises
KeyError –
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select(event_names=None, date=None, orig=None, reg_id=None, reset_frequency=False)[source]¶ Select events matching provided criteria
The frequency of events may need to be recomputed (see reset_frequency)!
- Parameters
event_names (list of str, optional) – Names of events.
date (array-like of length 2 containing str or int, optional) – (initial date, final date) in string ISO format (‘2011-01-02’) or datetime ordinal integer.
orig (bool, optional) – Select only historical (True) or only synthetic (False) events.
reg_id (int, optional) – Region identifier of the centroids’ region_id attibute.
reset_frequency (bool, optional) – Change frequency of events proportional to difference between first and last year (old and new). Default: False.
- Returns
haz – If no event matching the specified criteria is found, None is returned.
- Return type
Hazard or None
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local_exceedance_inten(return_periods=(25, 50, 100, 250))[source]¶ Compute exceedance intensity map for given return periods.
- Parameters
return_periods (np.array) – return periods to consider
- Returns
np.array
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plot_rp_intensity(return_periods=(25, 50, 100, 250), smooth=True, axis=None, figsize=(9, 13), **kwargs)[source]¶ Compute and plot hazard exceedance intensity maps for different return periods. Calls local_exceedance_inten.
- Parameters
return_periods (tuple(int), optional) – return periods to consider
smooth (bool, optional) – smooth plot to plot.RESOLUTIONxplot.RESOLUTION
axis (matplotlib.axes._subplots.AxesSubplot, optional) – axis to use
figsize (tuple, optional) – figure size for plt.subplots
kwargs (optional) – arguments for pcolormesh matplotlib function used in event plots
- Returns
matplotlib.axes._subplots.AxesSubplot, np.ndarray (return_periods.size x num_centroids)
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plot_intensity(event=None, centr=None, smooth=True, axis=None, **kwargs)[source]¶ Plot intensity values for a selected event or centroid.
- Parameters
event (int or str, optional) – If event > 0, plot intensities of event with id = event. If event = 0, plot maximum intensity in each centroid. If event < 0, plot abs(event)-largest event. If event is string, plot events with that name.
centr (int or tuple, optional) – If centr > 0, plot intensity of all events at centroid with id = centr. If centr = 0, plot maximum intensity of each event. If centr < 0, plot abs(centr)-largest centroid where higher intensities are reached. If tuple with (lat, lon) plot intensity of nearest centroid.
smooth (bool, optional) – Rescale data to RESOLUTIONxRESOLUTION pixels (see constant in module climada.util.plot)
axis (matplotlib.axes._subplots.AxesSubplot, optional) – axis to use
kwargs (optional) – arguments for pcolormesh matplotlib function used in event plots or for plot function used in centroids plots
- Returns
matplotlib.axes._subplots.AxesSubplot
- Raises
ValueError –
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plot_fraction(event=None, centr=None, smooth=True, axis=None, **kwargs)[source]¶ Plot fraction values for a selected event or centroid.
- Parameters
event (int or str, optional) – If event > 0, plot fraction of event with id = event. If event = 0, plot maximum fraction in each centroid. If event < 0, plot abs(event)-largest event. If event is string, plot events with that name.
centr (int or tuple, optional) – If centr > 0, plot fraction of all events at centroid with id = centr. If centr = 0, plot maximum fraction of each event. If centr < 0, plot abs(centr)-largest centroid where highest fractions are reached. If tuple with (lat, lon) plot fraction of nearest centroid.
smooth (bool, optional) – Rescale data to RESOLUTIONxRESOLUTION pixels (see constant in module climada.util.plot)
axis (matplotlib.axes._subplots.AxesSubplot, optional) – axis to use
kwargs (optional) – arguments for pcolormesh matplotlib function used in event plots or for plot function used in centroids plots
- Returns
matplotlib.axes._subplots.AxesSubplot
- Raises
ValueError –
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get_event_id(event_name)[source]¶ Get an event id from its name. Several events might have the same name.
- Parameters
event_name (str) – Event name
- Returns
np.array(int)
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get_event_name(event_id)[source]¶ Get the name of an event id.
- Parameters
event_id (int) – id of the event
- Returns
str
- Raises
ValueError –
-
get_event_date(event=None)[source]¶ Return list of date strings for given event or for all events, if no event provided.
- Parameters
event (str or int, optional) – event name or id.
- Returns
list(str)
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calc_year_set()[source]¶ From the dates of the original events, get number yearly events.
- Returns
key are years, values array with event_ids of that year
- Return type
dict
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append(hazard)[source]¶ Append events and centroids in hazard.
- Parameters
hazard (Hazard) – Hazard instance to append to current
- Raises
ValueError –
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set_frequency(yearrange=None)[source]¶ Set hazard frequency from yearrange or intensity matrix.
- Optional parameters:
- yearrange (tuple or list): year range to be used to compute frequency
per event. If yearrange is not given (None), the year range is derived from self.date
-
property
size¶ Returns number of events
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write_raster(file_name, intensity=True)[source]¶ Write intensity or fraction as GeoTIFF file. Each band is an event
- Parameters
file_name (str) – file name to write in tif format
intensity (bool) – if True, write intensity, otherwise write fraction
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write_hdf5(file_name, todense=False)[source]¶ Write hazard in hdf5 format.
- Parameters
file_name (str) – file name to write, with h5 format
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read_hdf5(file_name)[source]¶ Read hazard in hdf5 format.
- Parameters
file_name (str) – file name to read, with h5 format
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concatenate(haz_src, append=False)[source]¶ Concatenate events of several hazards
- Parameters
haz_src (list) – Hazard instances with same centroids and units
append (bool) – If True, append the concatenated hazards to this instance, otherwise replace all data in this instance by the concatenated data. Default: False.
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climada.hazard.drought module¶
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class
climada.hazard.drought.Drought[source]¶ Bases:
climada.hazard.base.HazardContains drought events.
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SPEI¶ Standardize Precipitation Evapotraspiration Index
- Type
float
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vars_opt= {'spei'}¶ Name of the variables that aren’t need to compute the impact.
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hazard_def(intensity_matrix)[source]¶ return hazard set Parameters: see intensity_from_spei :returns: Drought, full hazard set
check using new_haz.check()
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climada.hazard.isimip_data module¶
climada.hazard.landslide module¶
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class
climada.hazard.landslide.Landslide[source]¶ Bases:
climada.hazard.base.HazardLandslide Hazard set generation. Attributes:
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set_ls_hist(bbox, input_gdf, res=0.0083333)[source]¶ Set historic landslide (ls) raster hazard from historical point records, for example as can be retrieved from the NASA COOLR initiative, which is the largest global ls repository, for a specific geographic extent. Points are assigned to the gridcell they fall into, and the whole grid- cell hence counts as equally affected. Event frequencies from an incomplete dataset are not meaningful and hence aren’t set by default. probabilistic calculations! Use the probabilistic method for this!
See tutorial for details; the global ls catalog from NASA COOLR can bedownloaded from https://maps.nccs.nasa.gov/arcgis/apps/webappviewer/index.html?id=824ea5864ec8423fb985b33ee6bc05b7
Note
The grid which is generated has the same projection as the geodataframe with point occurrences. By default, this is EPSG:4326, which is a non- projected, geographic CRS. This means, depending on where on the globe the analysis is performed, the area per gridcell differs vastly. Consider this when setting your resoluton (e.g. at the equator, 1° ~ 111 km). In turn, one can use projected CRS which preserve angles and areas within the reference area for which they are defined. To do this, reproject the input_gdf to the desired projection. For more on projected & geographic CRS, see https://desktop.arcgis.com/en/arcmap/10.3/guide-books/map-projections/about-projected-coordinate-systems.htm
- bboxtuple
(minx, miny, maxx, maxy) geographic extent of interest
- input_gdfstr or or geopandas geodataframe
path to shapefile (.shp) with ls point data or already laoded gdf
- resfloat
resolution in units of the input_gdf crs of the final grid cells which are created. Whith EPSG:4326, this is degrees. Default is 0.008333.
- self (Landslide() inst.): instance filled with historic LS hazard
set for either point hazards or polygons with specified surrounding extent.
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set_ls_prob(bbox, path_sourcefile, corr_fact=10000000.0, n_years=500, dist='poisson')[source]¶ Set probabilistic landslide hazard (fraction, intensity and frequency) for a defined bounding box and time period from a raster. The hazard data for which this function is explicitly written is readily provided by UNEP & the Norwegian Geotechnical Institute (NGI), and can be downloaded and unzipped from https://preview.grid.unep.ch/index.php?preview=data&events=landslides&evcat=2&lang=eng for precipitation-triggered landslide and from https://preview.grid.unep.ch/index.php?preview=data&events=landslides&evcat=1&lang=eng for earthquake-triggered landslides. It works of course with any similar raster file. Original data is given in expected annual probability and percentage of pixel of occurrence of a potentially destructive landslide event x 1000000 (so be sure to adjust this by setting the correction factor). More details can be found in the landslide tutorial and under above- mentioned links.
Events are sampled from annual occurrence probabilites via binomial or poisson distribution; intensity takes a binary value (0 - no ls occurrence; 1 - ls occurrence) and fraction stores the actual the occurrence count (0 to n) per grid cell. Frequency is occurrence count / n_years.
Impact functions, since they act on the intensity, should hence be in the form of a step function, defining impact for intensity 0 and (close to) 1.
- Parameters
bbox (tuple) – (minx, miny, maxx, maxy) geographic extent of interest
path_sourcefile (str) – path to UNEP/NGI ls hazard file (.tif)
corr_fact (float or int) – factor by which to divide the values in the original probability file, in case it is not scaled to [0,1]. Default is 1’000’000
n_years (int) – sampling period
dist (str)
distribution to sample from. ‘poisson’ (default) and ‘binom’
- Returns
self – probabilistic LS hazard
- Return type
climada.hazard.Landslide instance
See also
sample_events_from_probs
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climada.hazard.low_flow module¶
-
class
climada.hazard.low_flow.LowFlow(pool=None)[source]¶ Bases:
climada.hazard.base.HazardContains river low flow events (surface water scarcity). The intensity of the hazard is number of days below a threshold (defined as percentile in reference data). The method set_from_nc can be used to create a LowFlow hazard set populated with data based on gridded hydrological model runs as provided by the ISIMIP project (https://www.isimip.org/), e.g. ISIMIP2a/b. grid cells with a minimum number of days below threshold per month are clustered in space (lat/lon) and time (monthly) to identify and set connected events.
-
clus_thresh_t¶ maximum time difference in months to be counted as$ connected points during clustering, default = 1
- Type
int
-
clus_thresh_xy¶ maximum spatial grid cell distance in number of cells to be counted as connected points during clustering, default = 2
- Type
int
-
min_samples¶ Minimum amount of data points in one cluster to consider as event, default = 1.
- Type
1
-
date_start¶ for each event, the date of the first month of the event (ordinal) Note: Hazard attribute ‘date’ contains the date of maximum event intensity.
- Type
np.array(int)
-
date_end¶ for each event, the date of the last month of the event (ordinal)
- Type
np.array(int)
-
resolution¶ spatial resoultion of gridded discharge input data in degree lat/lon, default = 0.5°
- Type
float
-
clus_thresh_t= 1¶
-
clus_thresh_xy= 2¶
-
min_samples= 1¶
-
resolution= 0.5¶
-
set_from_nc(input_dir=None, centroids=None, countries=None, reg=None, bbox=None, percentile=2.5, min_intensity=1, min_number_cells=1, min_days_per_month=1, yearrange=(2001, 2005), yearrange_ref=(1971, 2005), gh_model=None, cl_model=None, scenario='historical', scenario_ref='historical', soc='histsoc', soc_ref='histsoc', fn_str_var='co2_dis_global_daily', keep_dis_data=False, yearchunks='default', mask_threshold=('mean', 1))[source]¶ Wrapper to fill hazard from NetCDF file containing variable dis (daily), e.g. as provided from from ISIMIP Water Sectior (Global):
- Parameters
input_dir (string) – path to input data directory. In this folder, netCDF files with gridded hydrological model output are required, containing the variable dis (discharge) on a daily temporal resolution as f.i. provided by the ISIMIP project (https://www.isimip.org/)
centroids (Centroids) – centroids (area that is considered, reg and country must be None)
countries (list of countries ISO3) – (reg must be None!) [not yet implemented]
reg (list of regions) – can be set with region code if whole areas are considered (if not None, countries and centroids are ignored) [not yet implemented]
bbox (tuple of four floats) – bounding box: (lon min, lat min, lon max, lat max)
percentile (float) – percentile used to compute threshold, 0.0 < percentile < 100.0
min_intensity (int) – minimum intensity (nr of days) in an event event; events with lower max. intensity are dropped
min_number_cells (int) – minimum spatial extent (nr of grid cells) in an event event; events with lower geographical extent are dropped
min_days_per_month (int) – minimum nr of days below threshold in a month; months with lower nr of days below threshold are not considered for the event creation (clustering)
yearrange (int tuple) – year range for hazard set, f.i. (2001, 2005)
yearrange_ref (int tuple) – year range for reference (threshold), f.i. (1971, 2000)
gh_model (str) – abbrev. hydrological model (only when input_dir is selected) f.i. ‘H08’, ‘CLM45’, ‘ORCHIDEE’, ‘LPJmL’, ‘WaterGAP2’, ‘JULES-W1’, ‘MATSIRO’
cl_model (str) – abbrev. climate model (only when input_dir is selected) f.i. ‘gfdl-esm2m’, ‘hadgem2-es’, ‘ipsl-cm5a-lr’, ‘miroc5’, ‘gswp3’, ‘wfdei’, ‘princeton’, ‘watch’
scenario (str) – climate change scenario (only when input_dir is selected) f.i. ‘historical’, ‘rcp26’, ‘rcp60’, ‘hist’
scenario_ref (str) – climate change scenario for reference (only when input_dir is selected)
soc (str) – socio-economic trajectory (only when input_dir is selected) f.i. ‘histsoc’, # historical trajectory
‘2005soc’, # constant at 2005 level ‘rcp26soc’, # RCP6.0 trajectory ‘rcp60soc’, # RCP6.0 trajectory ‘pressoc’ # constant at pre-industrial socio-economic level
soc_ref (str) – csocio-economic trajectory for reference, like soc. (only when input_dir is selected)
fn_str_var (str) – FileName STRing depending on VARiable and ISIMIP simuation round
keep_dis_data (boolean) – keep monthly data (variable ndays = days below threshold) as dataframe (attribute “data”) and save additional field ‘relative_dis’ (relative discharge compared to the long term)
yearchunks – list of year chunks corresponding to each nc flow file. If set to ‘default’, uses the chunking corresponding to the scenario.
mask_threshold – tuple with threshold value [1] for criterion [0] for mask: Threshold below which the grid is masked out. e.g.: (‘mean’, 1.) –> grid cells with a mean discharge below 1 are ignored (‘percentile’, .3) –> grid cells with a value of the computed percentile discharge values below 0.3 are ignored. default: (‘mean’, 1}). Set to None for no threshold. Provide a list of tuples for multiple thresholds.
- Raises
NameError –
-
set_intensity_from_clusters(centroids=None, min_intensity=1, min_number_cells=1, yearrange=(2001, 2005), yearrange_ref=(1971, 2005), gh_model=None, cl_model=None, scenario='historical', scenario_ref='historical', soc='histsoc', soc_ref='histsoc', fn_str_var='co2_dis_global_daily', keep_dis_data=False)[source]¶ Build low flow hazards with events from clustering and centroids and add attributes.
-
events_from_clusters(centroids)[source]¶ Initiate hazard events from connected clusters found in self.lowflow_df
- Parameters
centroids (Centroids)
-
identify_clusters(clus_thresh_xy=None, clus_thresh_t=None, min_samples=None)[source]¶ call clustering functions to identify the clusters inside the dataframe
- Optional parameters:
- clus_thresh_xy (int): new value of maximum grid cell distance
(number of grid cells) to be counted as connected points during clustering
- clus_thresh_t (int): new value of maximum timse step difference (months)
to be counted as connected points during clustering
- min_samples (int): new value or minimum amount of data points in one
cluster to retain the cluster as an event, smaller clusters will be ignored
- Returns
pandas.DataFrame
-
filter_events(min_intensity=1, min_number_cells=1)[source]¶ Remove events with max intensity below min_intensity or spatial extend below min_number_cells
- Parameters
min_intensity (int or float) – Minimum criterion for intensity
min_number_cells (int or float) – Minimum crietrion for number of grid cell
- Returns
Hazard
-
climada.hazard.relative_cropyield module¶
-
class
climada.hazard.relative_cropyield.RelativeCropyield(pool=None)[source]¶ Bases:
climada.hazard.base.HazardAgricultural climate risk: Relative Cropyield (relative to historical mean); Each year corresponds to one hazard event; Based on modelled crop yield, from ISIMIP (www.isimip.org, required input data). Attributes as defined in Hazard and the here defined additional attributes.
-
crop_type¶ crop type (‘whe’ for wheat, ‘mai’ for maize, ‘soy’ for soybeans and ‘ric’ for rice)
- Type
str
-
intensity_def¶ intensity defined as: ‘Yearly Yield’ [t/(ha*y)], ‘Relative Yield’, or ‘Percentile’
- Type
str
-
set_from_isimip_netcdf(input_dir=None, filename=None, bbox=None, yearrange=None, ag_model=None, cl_model=None, bias_corr=None, scenario=None, soc=None, co2=None, crop=None, irr=None, fn_str_var=None)[source]¶ Wrapper to fill hazard from crop yield NetCDF file. Build and tested for output from ISIMIP2 and ISIMIP3, but might also work for other NetCDF containing gridded crop model output from other sources. :Parameters: * input_dir (Path or str) – path to input data directory,
default: {CONFIG.exposures.crop_production.local_data}/Input/Exposure
filename (string) – name of netcdf file in input_dir. If filename is given, the other parameters specifying the model run are not required!
bbox (list of four floats) – bounding box: [lon min, lat min, lon max, lat max]
yearrange (int tuple) – year range for hazard set, f.i. (1976, 2005)
ag_model (str) – abbrev. agricultural model (only when input_dir is selected) f.i. ‘clm-crop’, ‘gepic’,’lpjml’,’pepic’
cl_model (str) – abbrev. climate model (only when input_dir is selected) f.i. [‘gfdl-esm2m’, ‘hadgem2-es’,’ipsl-cm5a-lr’,’miroc5’
bias_corr (str) – bias correction of climate forcing, f.i. ‘ewembi’ (ISIMIP2b, default) or ‘w5e5’ (ISIMIP3b)
scenario (str) – climate change scenario (only when input_dir is selected) f.i. ‘historical’ or ‘rcp60’ or ‘ISIMIP2a’
soc (str) – socio-economic trajectory (only when input_dir is selected) f.i. ‘2005soc’ or ‘histsoc’
co2 (str) – CO2 forcing scenario (only when input_dir is selected) f.i. ‘co2’ or ‘2005co2’
crop (str) – crop type (only when input_dir is selected) f.i. ‘whe’, ‘mai’, ‘soy’ or ‘ric’
irr (str) – irrigation type (only when input_dir is selected) f.i ‘noirr’ or ‘irr’
fn_str_var (str) – FileName STRing depending on VARiable and ISIMIP simuation round
- Raises
NameError –
-
calc_mean(yearrange_mean=None, save=False, output_dir=None)[source]¶ Calculates mean of the hazard for a given reference time period
Optional Parameters: yearrange_mean (array): time period used to calculate the mean intensity
default: 1976-2005 (historical)
save (boolean): save mean to file? default: False output_dir (str or Path): path of output directory,
default: {CONFIG.exposures.crop_production.local_data}/Output
- Returns
- contains mean value over the given reference
time period for each centroid
- Return type
hist_mean(array)
-
set_rel_yield_to_int(hist_mean)[source]¶ Sets relative yield (yearly yield / historic mean) as intensity
- Parameters
hist_mean (array) – historic mean per centroid
- Returns
hazard with modified intensity [unitless]
-
set_percentile_to_int(reference_intensity=None)[source]¶ Sets percentile to intensity
- Parameters
reference_intensity (AD) – intensity to be used as reference (e.g. the historic intensity can be used in order to be able
to directly compare historic and future projection data)
- Returns
hazard with modified intensity
-
plot_intensity_cp(event=None, dif=False, axis=None, **kwargs)[source]¶ Plots intensity with predefined settings depending on the intensity definition
- Optional Parameters:
event (int or str): event_id or event_name dif (boolean): variable signilizing whether absolute values or the difference between
future and historic are plotted (False: his/fut values; True: difference = fut-his)
axis (geoaxes): axes to plot on
- Returns
axes (geoaxes)
-
climada.hazard.river_flood module¶
-
class
climada.hazard.river_flood.RiverFlood[source]¶ Bases:
climada.hazard.base.HazardContains flood events Flood intensities are calculated by means of the CaMa-Flood global hydrodynamic model
-
fla_event¶ - Type
1d array(n_events)
-
fla_annual¶ - Type
1d array (n_years)
-
fla_ann_av¶ - Type
float
-
fla_ev_av¶ - Type
float
-
fla_ann_centr¶ every centroid for every event
- Type
2d array(n_years x n_centroids)
-
fla_ev_centr¶ every centroid for every event
- Type
2d array(n_events x n_centroids)
-
set_from_nc(dph_path=None, frc_path=None, origin=False, centroids=None, countries=None, reg=None, shape=None, ISINatIDGrid=False, years=None)[source]¶ Wrapper to fill hazard from nc_flood file :Parameters: * dph_path (string) – Flood file to read (depth)
frc_path (string) – Flood file to read (fraction)
origin (bool) – Historical or probabilistic event
centroids (Centroids) – centroids to extract
countries (list of countries ISO3) – (reg must be None!)
reg (list of regions) – can be set with region code if whole areas are considered (if not None, countries and centroids are ignored)
ISINatIDGrid (Bool) – Indicates whether ISIMIP_NatIDGrid is used
years (int list) – years that are considered
- Raises
NameError –
-
exclude_trends(fld_trend_path, dis)[source]¶ Function allows to exclude flood impacts that are caused in areas exposed discharge trends other than the selected one. (This function is only needed for very specific applications) :raises NameError:
-
exclude_returnlevel(frc_path)[source]¶ Function allows to exclude flood impacts below a certain return level by manipulating flood fractions in a way that the array flooded more frequently than the treshold value is excluded. (This function is only needed for very specific applications) :raises NameErroris function:
-
climada.hazard.storm_europe module¶
-
class
climada.hazard.storm_europe.StormEurope[source]¶ Bases:
climada.hazard.base.HazardA hazard set containing european winter storm events. Historic storm events can be downloaded at http://wisc.climate.copernicus.eu/ and read read_footprints(). Weather forecasts can be automatically downloaded from https://opendata.dwd.de/ and read with read_icon_grib(). Weather forecast from the COSMO-Consortium http://www.cosmo-model.org/ can be read with read_cosmoe_file().
-
ssi_wisc¶ Storm Severity Index (SSI) as recorded in the footprint files; apparently not reproducible from the footprint values only.
- Type
np.array, float
-
ssi¶ SSI as set by set_ssi; uses the Dawkins definition by default.
- Type
np.array, float
-
intensity_thres= 14.7¶ Intensity threshold for storage in m/s; same as used by WISC SSI calculations.
-
vars_opt= {'ssi', 'ssi_full_area', 'ssi_wisc'}¶ Name of the variables that aren’t need to compute the impact.
-
read_footprints(path, description=None, ref_raster=None, centroids=None, files_omit='fp_era20c_1990012515_701_0.nc', combine_threshold=None)[source]¶ Clear instance and read WISC footprints into it. Read Assumes that all footprints have the same coordinates as the first file listed/first file in dir.
- Parameters
path (str, list(str)) – A location in the filesystem. Either a path to a single netCDF WISC footprint, or a folder containing only footprints, or a globbing pattern to one or more footprints.
description (str, optional) – description of the events, defaults to ‘WISC historical hazard set’
ref_raster (str, optional) – Reference netCDF file from which to construct a new barebones Centroids instance. Defaults to the first file in path.
centroids (Centroids, optional) – A Centroids struct, overriding ref_raster
files_omit (str, list(str), optional) – List of files to omit; defaults to one duplicate storm present in the WISC set as of 2018-09-10.
combine_threshold (int, optional) – threshold for combining events in number of days. if the difference of the dates (self.date) of two events is smaller or equal to this threshold, the two events are combined into one. Default is None, Advised for WISC is 2
-
read_cosmoe_file(fp_file, run_datetime, event_date=None, model_name='COSMO-2E', description=None)[source]¶ Clear instance and read gust footprint from weather forecast into it. The funciton is designed for the COSMO ensemble model used by the COSMO Consortium http://www.cosmo-model.org/ and postprocessed to an netcdf file using fieldextra. One event is one full day in UTC. Works for MeteoSwiss model output of COSMO-1E (11 members, resolution 1.1 km, forecast period 33-45 hours) COSMO-2E (21 members, resolution 2.2 km, forecast period 5 days)
- Parameters
fp_file (str) – string directing to one netcdf file
run_datetime (datetime) – The starting timepoint of the forecast run of the cosmo model
event_date (datetime, optional) – one day within the forecast period, only this day (00H-24H) will be included in the hazard
model_name (str,optional) – provide the name of the COSMO model, for the description (e.g., ‘COSMO-1E’, ‘COSMO-2E’)
description (str, optional) – description of the events, defaults to a combination of model_name and run_datetime
-
read_icon_grib(run_datetime, event_date=None, model_name='icon-eu-eps', description=None, grib_dir=None, delete_raw_data=True)[source]¶ Clear instance and download and read dwd icon weather forecast footprints into it. New files are available for 24 hours on https://opendata.dwd.de, old files can be processed if they are already stored in grib_dir. One event is one full day in UTC. Current setup works for runs starting at 00H and 12H. Otherwise the aggregation is inaccurate, because of the given file structure with 1-hour, 3-hour and 6-hour maxima provided.
- Parameters
run_datetime (datetime) – The starting timepoint of the forecast run of the icon model
event_date (datetime, optional) – one day within the forecast period, only this day (00H-24H) will be included in the hazard
model_name (str,optional) – select the name of the icon model to be downloaded. Must match the url on https://opendata.dwd.de (see download_icon_grib for further info)
description (str, optional) – description of the events, defaults to a combination of model_name and run_datetime
grib_dir (str, optional) – path to folder, where grib files are or should be stored
delete_raw_data (bool,optional) – select if downloaded raw data in .grib.bz2 file format should be stored on the computer or removed
-
calc_ssi(method='dawkins', intensity=None, on_land=True, threshold=None, sel_cen=None)[source]¶ Calculate the SSI, method must either be ‘dawkins’ or ‘wisc_gust’.
‘dawkins’, after Dawkins et al. (2016), doi:10.5194/nhess-16-1999-2016, matches the MATLAB version. ssi = sum_i(area_cell_i * intensity_cell_i^3)
‘wisc_gust’, according to the WISC Tier 1 definition found at https://wisc.climate.copernicus.eu/wisc/#/help/products#tier1_section ssi = sum(area_on_land) * mean(intensity)^3
In both definitions, only raster cells that are above the threshold are used in the computation. Note that this method does not reproduce self.ssi_wisc, presumably because the footprint only contains the maximum wind gusts instead of the sustained wind speeds over the 72 hour window. The deviation may also be due to differing definitions of what lies on land (i.e. Syria, Russia, Northern Africa and Greenland are exempt).
- Parameters
method (str) – Either ‘dawkins’ or ‘wisc_gust’
intensity (scipy.sparse.csr) – Intensity matrix; defaults to self.intensity
on_land (bool) – Only calculate the SSI for areas on land, ignoring the intensities at sea. Defaults to true, whereas the MATLAB version did not.
threshold (float, optional) – Intensity threshold used in index definition. Cannot be lower than the read-in value.
sel_cen (np.array, bool) – A boolean vector selecting centroids. Takes precendence over on_land.
-
self.ssi_dawkins¶ SSI per event
- Type
np.array
-
set_ssi(**kwargs)[source]¶ Wrapper around calc_ssi for setting the self.ssi attribute.
- Parameters
**kwargs – passed on to calc_ssi
-
ssi¶ SSI per event
- Type
np.array
-
plot_ssi(full_area=False)[source]¶ - Plot the distribution of SSIs versus their cumulative exceedance
frequencies, highlighting historical storms in red.
- Returns
fig (matplotlib.figure.Figure) ax (matplotlib.axes._subplots.AxesSubplot)
-
generate_prob_storms(reg_id=528, spatial_shift=4, ssi_args=None, **kwargs)[source]¶ Generates a new hazard set with one original and 29 probabilistic storms per historic storm. This represents a partial implementation of the Monte-Carlo method described in section 2.2 of Schwierz et al. (2010), doi:10.1007/s10584-009-9712-1. It omits the rotation of the storm footprints, as well as the pseudo- random alterations to the intensity.
In a first step, the original intensity and five additional intensities are saved to an array. In a second step, those 6 possible intensity levels are shifted by n raster pixels into each direction (N/S/E/W).
- Caveats:
Memory safety is an issue; trial with the entire dataset resulted in 60GB of swap memory being used…
Can only use numeric region_id for country selection
Drops event names as provided by WISC
- Parameters
region_id (int, list of ints, or None) – iso_n3 code of the countries we want the generated hazard set to be returned for.
spatial_shift (int) – amount of raster pixels to shift by
ssi_args (dict) – A dictionary of arguments passed to calc_ssi
**kwargs – keyword arguments passed on to self._hist2prob()
- Returns
- A new hazard set for the given country.
Centroid attributes are preserved. self.orig attribute is set to True for original storms (event_id ending in 00). Also contains a ssi_prob attribute,
- Return type
new_haz (StormEurope)
-
climada.hazard.tag module¶
-
class
climada.hazard.tag.Tag(haz_type='', file_name='', description='')[source]¶ Bases:
objectContain information used to tag a Hazard.
-
file_name¶ name of the source file(s)
- Type
str or list(str)
-
haz_type¶ acronym defining the hazard type (e.g. ‘TC’)
- Type
str
-
description¶ description(s) of the data
- Type
str or list(str)
-
climada.hazard.tc_clim_change module¶
-
climada.hazard.tc_clim_change.TOT_RADIATIVE_FORCE= PosixPath('/home/docs/climada/data/rcp_db.xls')¶ //www.iiasa.ac.at/web-apps/tnt/RcpDb. generated: 2018-07-04 10:47:59.
- Type
© RCP Database (Version 2.0.5) http
-
climada.hazard.tc_clim_change.get_knutson_criterion()[source]¶ Fill changes in TCs according to Knutson et al. 2015 Global projections of intense tropical cyclone activity for the late twenty-first century from dynamical downscaling of CMIP5/RCP4.5 scenarios.
- Returns
list(dict) with items ‘criteria’ (dict with variable_name and list(possible values)), ‘year’ (int), ‘change’ (float), ‘variable’ (str), ‘function’ (np function)
-
climada.hazard.tc_clim_change.calc_scale_knutson(ref_year=2050, rcp_scenario=45)[source]¶ Comparison 2081-2100 (i.e., late twenty-first century) and 2001-20 (i.e., present day). Late twenty-first century effects on intensity and frequency per Saffir-Simpson-category and ocean basin is scaled to target year and target RCP proportional to total radiative forcing of the respective RCP and year.
- Parameters
ref_year (int) – year between 2000 ad 2100. Default: 2050
rcp_scenario (int) – 26 for RCP 2.6, 45 for RCP 4.5 (default), 60 for RCP 6.0 and 85 for RCP 8.5.
- Returns
float
climada.hazard.tc_rainfield module¶
-
class
climada.hazard.tc_rainfield.TCRain(pool=None)[source]¶ Bases:
climada.hazard.base.HazardContains rainfall from tropical cyclone events.
-
intensity_thres= 0.1¶ intensity threshold for storage in mm
-
set_from_tracks(tracks, centroids=None, dist_degree=3, description='')[source]¶ Computes rainfield from tracks based on the RCLIPER model. Parallel process. :Parameters: * tracks (TCTracks) – tracks of events
centroids (Centroids, optional) – Centroids where to model TC. Default: global centroids.
disr_degree (int) – distance (in degrees) from node within which the rainfield is processed (default 3 deg,~300km)
description (str, optional) – description of the events
-
climada.hazard.tc_surge_bathtub module¶
-
class
climada.hazard.tc_surge_bathtub.TCSurgeBathtub[source]¶ Bases:
climada.hazard.base.HazardTC surge heights in m, a bathtub model with wind-surge relationship and inland decay.
-
__init__()[source]¶ Initialize values.
- Parameters
haz_type (str, optional) – acronym of the hazard type (e.g. ‘TC’).
Examples
Fill hazard values by hand:
>>> haz = Hazard('TC') >>> haz.intensity = sparse.csr_matrix(np.zeros((2, 2))) >>> ...
Take hazard values from file:
>>> haz = Hazard('TC', HAZ_DEMO_MAT) >>> haz.read_mat(HAZ_DEMO_MAT, 'demo')
-
static
from_tc_winds(wind_haz, topo_path, inland_decay_rate=0.2, add_sea_level_rise=0.0)[source]¶ Compute tropical cyclone surge from input winds.
- Parameters
wind_haz (TropCyclone) – Tropical cyclone wind hazard object.
topo_path (str) – Path to a raster file containing gridded elevation data.
inland_decay_rate (float, optional) – Decay rate of surge when moving inland in meters per km. Set to 0 to deactivate this effect. The default value of 0.2 is taken from Section 5.2.1 of the monograph Pielke and Pielke (1997): Hurricanes: their nature and impacts on society. https://rogerpielkejr.com/2016/10/10/hurricanes-their-nature-and-impacts-on-society/
add_sea_level_rise (float, optional) – Sea level rise effect in meters to be added to surge height.
-
climada.hazard.tc_tracks module¶
-
climada.hazard.tc_tracks.CAT_NAMES= {-1: 'Tropical Depression', 0: 'Tropical Storm', 1: 'Hurricane Cat. 1', 2: 'Hurricane Cat. 2', 3: 'Hurricane Cat. 3', 4: 'Hurricane Cat. 4', 5: 'Hurricane Cat. 5'}¶ Saffir-Simpson category names.
-
climada.hazard.tc_tracks.SAFFIR_SIM_CAT= [34, 64, 83, 96, 113, 137, 1000]¶ Saffir-Simpson Hurricane Wind Scale in kn based on NOAA
-
class
climada.hazard.tc_tracks.TCTracks(pool=None)[source]¶ Bases:
objectContains tropical cyclone tracks.
-
data¶ - List of tropical cyclone tracks. Each track contains following attributes:
time (coords)
lat (coords)
lon (coords)
time_step (in hours)
radius_max_wind (in nautical miles)
max_sustained_wind
central_pressure
environmental_pressure
max_sustained_wind_unit (attrs)
central_pressure_unit (attrs)
name (attrs)
sid (attrs)
orig_event_flag (attrs)
data_provider (attrs)
basin (attrs)
id_no (attrs)
category (attrs)
- Computed during processing:
on_land
dist_since_lf
- Type
list(xarray.Dataset)
-
append(tracks)[source]¶ Append tracks to current.
- Parameters
tracks (xarray.Dataset or list(xarray.Dataset)) – tracks to append.
-
get_track(track_name=None)[source]¶ Get track with provided name.
Returns the first matching track based on the assumption that no other track with the same name or sid exists in the set.
- Parameters
track_name (str, optional) – Name or sid (ibtracsID for IBTrACS) of track. If None (default), return all tracks.
- Returns
result – Usually, a single track is returned. If no track with the specified name is found, an empty list [] is returned. If called with track_name=None, the list of all tracks is returned.
- Return type
xarray.Dataset or list of xarray.Dataset
-
subset(filterdict)[source]¶ Subset tracks based on track attributes.
Select all tracks matching exactly the given attribute values.
- Parameters
filterdict (dict or OrderedDict) – Keys are attribute names, values are the corresponding attribute values to match. In case of an ordered dict, the filters are applied in the given order.
- Returns
tc_tracks – A new instance of TCTracks containing only the matching tracks.
- Return type
-
tracks_in_exp(exposure, buffer=1.0)[source]¶ Select only the tracks that are in the vicinity (buffer) of an exposure.
Each exposure point/geometry is extended to a disc of radius buffer. Each track is converted to a line and extended by a radius buffer.
- Parameters
exposure (Exposure) – Exposure used to select tracks.
buffer (float, optional) – Size of buffer around exposure geometries (in the units of exposure.crs), see geopandas.distance. Default: 1.0
- Returns
filtered_tracks – TCTracks object with tracks from tc_tracks intersecting the exposure whitin a buffer distance.
- Return type
climada.hazard.TCTracks()
-
read_ibtracs_netcdf(provider=None, rescale_windspeeds=True, storm_id=None, year_range=None, basin=None, interpolate_missing=True, estimate_missing=False, correct_pres=False, file_name='IBTrACS.ALL.v04r00.nc')[source]¶ Read track data from IBTrACS databse.
When using data from IBTrACS, make sure to be familiar with the scope and limitations of IBTrACS, e.g. by reading the official documentation (https://www.ncdc.noaa.gov/ibtracs/pdf/IBTrACS_version4_Technical_Details.pdf). Reading the CLIMADA documentation can’t replace a thorough understanding of the underlying data. This function only provides a (hopefully useful) interface for the data input, but cannot provide any guidance or make recommendations about if and how to use IBTrACS data for your particular project.
Resulting tracks are required to have both pressure and wind speed information at all time steps. Therefore, all track positions where one of wind speed or pressure are missing are discarded unless one of interpolate_missing or estimate_missing are active.
Some corrections are automatically applied, such as: environmental_pressure is enforced to be larger than central_pressure.
Note that the tracks returned by this function might contain irregular time steps since that is often the case for the original IBTrACS records. Apply the equal_timestep function afterwards to enforce regular time steps.
- Parameters
provider (str or list of str, optional) – Either specify an agency, such as “usa”, “newdelhi”, “bom”, “cma”, “tokyo”, or the special values “official” and “official_3h”: * “official” means using the (usually 6-hourly) officially reported values of the
officially responsible agencies.
“official_3h” means to include (inofficial) 3-hourly data of the officially responsible agencies (whenever available).
If you want to restrict to the officially reported values by the officially responsible agencies (provider=”official”) without any modifications to the original official data, make sure to also set estimate_missing=False and interpolate_missing=False. Otherwise, gaps in the official reporting will be filled using interpolation and/or statistical estimation procedures (see below). If a list is given, the following logic is applied: For each storm, the variables that are not reported by the first agency for this storm are taken from the next agency in the list that did report this variable for this storm. For different storms, the same variable might be taken from different agencies. Default: [‘official_3h’, ‘usa’, ‘tokyo’, ‘newdelhi’, ‘reunion’, ‘bom’, ‘nadi’, ‘wellington’, ‘cma’, ‘hko’, ‘ds824’, ‘td9636’, ‘td9635’, ‘neumann’, ‘mlc’]
rescale_windspeeds (bool, optional) – If True, all wind speeds are linearly rescaled to 1-minute sustained winds. Note however that the IBTrACS documentation (Section 5.2, https://www.ncdc.noaa.gov/ibtracs/pdf/IBTrACS_version4_Technical_Details.pdf) includes a warning about this kind of conversion: “While a multiplicative factor can describe the numerical differences, there are procedural and observational differences between agencies that can change through time, which confounds the simple multiplicative factor.” Default: True
storm_id (str or list of str, optional) – IBTrACS ID of the storm, e.g. 1988234N13299, [1988234N13299, 1989260N11316].
year_range (tuple (min_year, max_year), optional) – Year range to filter track selection. Default: (1980, 2018)
basin (str, optional) – E.g. US, SA, NI, SI, SP, WP, EP, NA. If not provided, consider all basins.
interpolate_missing (bool, optional) – If True, interpolate temporal reporting gaps within a variable (such as pressure, wind speed, or radius) linearly if possible. Temporal interpolation is with respect to the time steps defined in IBTrACS for a particular storm. No new time steps are added that are not originally defined in IBTrACS. For each time step with a missing value, this procedure is only able to fill in that value if there are other time steps before and after this time step for which values have been reported. This procedure will be applied before the statistical estimations referred to by estimate_missing. It is applied to all variables (eye position, wind speed, environmental and central pressure, storm radius and radius of maximum winds). Default: True
estimate_missing (bool, optional) – For each fixed time step, estimate missing pressure, wind speed and radius using other variables that are available at that time step. The relationships between the variables are purely statistical. In comparison to interpolate_missing, this procedure is able to estimate values for variables that haven’t been reported by any agency at any time step, as long as other variables are available. A typical example are storms before 1950, for which there are often no reported values for pressure, but for wind speed. In this case, a rough statistical pressure-wind relationship is applied to estimate the missing pressure values from the available wind-speed values. Make sure to set rescale_windspeeds=True when using this option because the statistical relationships are calibrated using rescaled wind speeds. Default: False
correct_pres (bool, optional) – For backwards compatibility, alias for estimate_missing. This is deprecated, use estimate_missing instead!
file_name (str, optional) – Name of NetCDF file to be dowloaded or located at climada/data/system. Default: ‘IBTrACS.ALL.v04r00.nc’
-
read_processed_ibtracs_csv(file_names)[source]¶ Fill from processed ibtracs csv file(s).
- Parameters
file_names (str or list of str) – Absolute file name(s) or folder name containing the files to read.
-
read_simulations_emanuel(file_names, hemisphere='S')[source]¶ Fill from Kerry Emanuel tracks.
- Parameters
file_names (str or list of str) – Absolute file name(s) or folder name containing the files to read.
hemisphere (str, optional) – ‘S’, ‘N’ or ‘both’. Default: ‘S’
-
read_one_gettelman(nc_data, i_track)[source]¶ Fill from Andrew Gettelman tracks.
- Parameters
nc_data (str) – netCDF4.Dataset Objekt
i_tracks (int) – track number
-
read_simulations_chaz(file_names, year_range=None, ensemble_nums=None)[source]¶ Read track output from CHAZ simulations
Lee, C.-Y., Tippett, M.K., Sobel, A.H., Camargo, S.J. (2018): An Environmentally Forced Tropical Cyclone Hazard Model. J Adv Model Earth Sy 10(1): 223–241.
- Parameters
file_names (str or list of str) – Absolute file name(s) or folder name containing the files to read.
year_range (tuple (min_year, max_year), optional) – Filter by year, if given.
ensemble_nums (list, optional) – Filter by ensembleNum, if given.
-
read_simulations_storm(path, years=None)[source]¶ Read track output from STORM simulations
Bloemendaal et al. (2020): Generation of a global synthetic tropical cyclone hazard dataset using STORM. Scientific Data 7(1): 40.
Track data available for download from
- Parameters
path (str) – Full path to a txt-file as contained in the data.zip archive from the official source linked above.
years (list of int, optional) – If given, only read the specified “years” from the txt-File. Note that a “year” refers to one ensemble of tracks in the data set that represents one sample year.
-
equal_timestep(time_step_h=1, land_params=False)[source]¶ Generate interpolated track values to time steps of time_step_h.
- Parameters
time_step_h (float or int, optional) – Temporal resolution in hours (positive, may be non-integer-valued). Default: 1.
land_params (bool, optional) – If True, recompute on_land and dist_since_lf at each node. Default: False.
-
property
size¶ Get longitude from coord array.
-
get_bounds(deg_buffer=0.1)[source]¶ Get bounds as (lon_min, lat_min, lon_max, lat_max) tuple.
- Parameters
deg_buffer (float) – A buffer to add around the bounding box
- Returns
bounds
- Return type
tuple (lon_min, lat_min, lon_max, lat_max)
-
property
bounds¶ Exact bounds of trackset as tuple, no buffer.
-
get_extent(deg_buffer=0.1)[source]¶ Get extent as (lon_min, lon_max, lat_min, lat_max) tuple.
- Parameters
deg_buffer (float) – A buffer to add around the bounding box
- Returns
extent
- Return type
tuple (lon_min, lon_max, lat_min, lat_max)
-
property
extent¶ Exact extent of trackset as tuple, no buffer.
-
plot(axis=None, figsize=(9, 13), legend=True, **kwargs)[source]¶ Track over earth. Historical events are blue, probabilistic black.
- Parameters
axis (matplotlib.axes._subplots.AxesSubplot, optional) – axis to use
figsize ((float, float), optional) – figure size for plt.subplots The default is (9, 13)
legend (bool, optional) – whether to display a legend of Tropical Cyclone categories. Default: True.
kwargs (optional) – arguments for LineCollection matplotlib, e.g. alpha=0.5
- Returns
axis
- Return type
matplotlib.axes._subplots.AxesSubplot
-
write_netcdf(folder_name)[source]¶ Write a netcdf file per track with track.sid name in given folder.
- Parameters
folder_name (str) – Folder name where to write files.
-
read_netcdf(folder_name)[source]¶ Read all netcdf files contained in folder and fill a track per file.
- Parameters
folder_name (str) – Folder name where to write files.
-
to_geodataframe(as_points=False, split_lines_antimeridian=True)[source]¶ Transform this TCTracks instance into a GeoDataFrame.
- Parameters
as_points (bool, optional) – If False (default), one feature (row) per track with a LineString or MultiLineString as geometry (or Point geometry for tracks of length one) and all track attributes (sid, name, orig_event_flag, etc) as dataframe columns. If True, one feature (row) per track time step, with variable values per time step (radius_max_wind, max_sustained_wind, etc) as columns in addition to attributes.
split_lines_antimeridian (bool, optional) – If True, tracks that cross the antimeridian are split into multiple Lines as a MultiLineString, with each Line on either side of the meridian. This ensures all Lines are within (-180, +180) degrees longitude. Note that lines might be split at more locations than strictly necessary, due to the underlying splitting algorithm (https://github.com/Toblerity/Shapely/issues/572).
- Returns
gdf
- Return type
GeoDataFrame
-
-
climada.hazard.tc_tracks.set_category(max_sus_wind, wind_unit='kn', saffir_scale=None)[source]¶ Add storm category according to Saffir-Simpson hurricane scale.
- Parameters
max_sus_wind (np.array) – Maximum sustained wind speed records for a single track.
wind_unit (str, optional) – Units of wind speed. Default: ‘kn’.
saffir_scale (list, optional) – Saffir-Simpson scale in same units as wind (default scale valid for knots).
- Returns
category –
- Intensity of given track according to the Saffir-Simpson hurricane scale:
-1 : tropical depression
0 : tropical storm
1 : Hurricane category 1
2 : Hurricane category 2
3 : Hurricane category 3
4 : Hurricane category 4
5 : Hurricane category 5
- Return type
int
climada.hazard.tc_tracks_forecast module¶
-
class
climada.hazard.tc_tracks_forecast.TCForecast(pool=None)[source]¶ Bases:
climada.hazard.tc_tracks.TCTracksAn extension of the TCTracks construct adapted to forecast tracks obtained from numerical weather prediction runs.
-
data¶ Same as in parent class, adding the following attributes
ensemble_member (int)
is_ensemble (bool)
- Type
list(xarray.Dataset)
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fetch_ecmwf(path=None, files=None)[source]¶ Fetch and read latest ECMWF TC track predictions from the FTP dissemination server into instance. Use path argument to use local files instead.
- Parameters
path (str, list(str)) – A location in the filesystem. Either a path to a single BUFR TC track file, or a folder containing only such files, or a globbing pattern. Passed to climada.util.files_handler.get_file_names
files (file-like) – An explicit list of file objects, bypassing get_file_names
-
static
fetch_bufr_ftp(target_dir=None, remote_dir=None)[source]¶ Fetch and read latest ECMWF TC track predictions from the FTP dissemination server. If target_dir is set, the files get downloaded persistently to the given location. A list of opened file-like objects gets returned.
- Parameters
target_dir (str) – An existing directory to write the files to. If None, the files get returned as tempfiles.
remote_dir (str, optional) – If set, search this ftp folder for forecast files; defaults to the latest. Format: yyyymmddhhmmss, e.g. 20200730120000
- Returns
[str] or [filelike]
-
read_one_bufr_tc(file, id_no=None, fcast_rep=None)[source]¶ Read a single BUFR TC track file.
- Parameters
file (str, filelike) – Path object, string, or file-like object
id_no (int) – Numerical ID; optional. Else use date + random int.
fcast_rep (int) – Of the form 1xx000, indicating the delayed replicator containing the forecast values; optional.
-
climada.hazard.tc_tracks_synth module¶
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climada.hazard.tc_tracks_synth.calc_perturbed_trajectories(tracks, nb_synth_tracks=9, max_shift_ini=0.75, max_dspeed_rel=0.3, max_ddirection=0.008726646259971648, autocorr_dspeed=0.85, autocorr_ddirection=0.5, seed=54, decay=True)[source]¶ Generate synthetic tracks based on directed random walk. An ensemble of nb_synth_tracks synthetic tracks is computed for every track contained in self.
The methodology perturbs the tracks locations, and if decay is True it additionally includes decay of wind speed and central pressure drop after landfall. No other track parameter is perturbed. The track starting point location is perturbed by random uniform values of magnitude up to max_shift_ini in both longitude and latitude. Then, each segment between two consecutive points is perturbed in direction and distance (i.e., translational speed). These perturbations can be correlated in time, i.e., the perturbation in direction applied to segment i is correlated with the perturbation in direction applied to segment i-1 (and similarly for the perturbation in translational speed). Perturbations in track direction and temporal auto-correlations in perturbations are on an hourly basis, and the perturbations in translational speed is relative. Hence, the parameter values are relatively insensitive to the temporal resolution of the tracks. Note however that all tracks should be at the same temporal resolution, which can be achieved using equal_timestep(). max_dspeed_rel and autocorr_dspeed control the spread along the track (‘what distance does the track run for’), while max_ddirection and autocorr_ddirection control the spread perpendicular to the track movement (‘how does the track diverge in direction’). max_dspeed_rel and max_ddirection control the amplitude of perturbations at each track timestep but perturbations may tend to compensate each other over time, leading to a similar location at the end of the track, while autocorr_dspeed and autocorr_ddirection control how these perturbations persist in time and hence the amplitude of the perturbations towards the end of the track.
Note that the default parameter values have been only roughly calibrated so that the frequency of tracks in each 5x5degree box remains approximately constant. This is not an in-depth calibration and should be treated as such. The object is mutated in-place.
- Parameters
tracks (climada.hazard.TCTracks) – Tracks data.
nb_synth_tracks (int, optional) – Number of ensemble members per track. Default: 9.
max_shift_ini (float, optional) – Amplitude of max random starting point shift in decimal degree (up to +/-max_shift_ini for longitude and latitude). Default: 0.75.
max_dspeed_rel (float, optional) – Amplitude of translation speed perturbation in relative terms (e.g., 0.2 for +/-20%). Default: 0.3.
max_ddirection (float, optional) – Amplitude of track direction (bearing angle) perturbation per hour, in radians. Default: pi/360.
autocorr_dspeed (float, optional) – Temporal autocorrelation in translation speed perturbation at a lag of 1 hour. Default: 0.85.
autocorr_ddirection (float, optional) – Temporal autocorrelation of translational direction perturbation at a lag of 1 hour. Default: 0.5.
seed (int, optional) – Random number generator seed for replicability of random walk. Put negative value if you don’t want to use it. Default: configuration file.
decay (bool, optional) – Whether to compute land decay in probabilistic tracks. Default: True.
climada.hazard.trop_cyclone module¶
-
class
climada.hazard.trop_cyclone.TropCyclone(pool=None)[source]¶ Bases:
climada.hazard.base.HazardContains tropical cyclone events. .. attribute:: category
for every event, the TC category using the Saffir-Simpson scale:
- -1 tropical depression
0 tropical storm 1 Hurrican category 1 2 Hurrican category 2 3 Hurrican category 3 4 Hurrican category 4 5 Hurrican category 5
- type
np.array(int)
-
basin¶ basin where every event starts ‘NA’ North Atlantic ‘EP’ Eastern North Pacific ‘WP’ Western North Pacific ‘NI’ North Indian ‘SI’ South Indian ‘SP’ Southern Pacific ‘SA’ South Atlantic
- Type
list(str)
-
intensity_thres= 17.5¶ intensity threshold for storage in m/s
-
vars_opt= {'category'}¶ Name of the variables that aren’t need to compute the impact.
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set_from_tracks(tracks, centroids=None, description='', model='H08', ignore_distance_to_coast=False, store_windfields=False, metric='equirect')[source]¶ Clear and fill with windfields from specified tracks.
- Parameters
tracks (TCTracks) – Tracks of storm events.
centroids (Centroids, optional) – Centroids where to model TC. Default: global centroids at 360 arc-seconds resolution.
description (str, optional) – Description of the event set. Default: “”.
model (str, optional) – Model to compute gust. Currently only ‘H08’ is supported for the one implemented in _stat_holland according to Greg Holland. Default: “H08”.
ignore_distance_to_coast (boolean, optional) – If True, centroids far from coast are not ignored. Default: False.
store_windfields (boolean, optional) – If True, the Hazard object gets a list windfields of sparse matrices. For each track, the full velocity vectors at each centroid and track position are stored in a sparse matrix of shape (npositions, ncentroids * 2) that can be reshaped to a full ndarray of shape (npositions, ncentroids, 2). Default: False.
metric (str, optional) – Specify an approximation method to use for earth distances: * “equirect”: Distance according to sinusoidal projection. Fast, but inaccurate for
large distances and high latitudes.
“geosphere”: Exact spherical distance. Much more accurate at all distances, but slow.
Default: “equirect”.
- Raises
ValueError –
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set_climate_scenario_knu(ref_year=2050, rcp_scenario=45)[source]¶ Compute future events for given RCP scenario and year. RCP 4.5 from Knutson et al 2015. :Parameters: * ref_year (int) – year between 2000 ad 2100. Default: 2050
rcp_scenario (int) – 26 for RCP 2.6, 45 for RCP 4.5 (default), 60 for RCP 6.0 and 85 for RCP 8.5.
- Returns
TropCyclone
-
static
video_intensity(track_name, tracks, centroids, file_name=None, writer=<matplotlib.animation.PillowWriter object>, figsize=(9, 13), **kwargs)[source]¶ Generate video of TC wind fields node by node and returns its corresponding TropCyclone instances and track pieces.
- Parameters
track_name (str) – name of the track contained in tracks to record
tracks (TCTracks) – tracks
centroids (Centroids) – centroids where wind fields are mapped
file_name (str, optional) – file name to save video, if provided
writer = (matplotlib.animation., optional*) – video writer. Default: pillow with bitrate=500
figsize (tuple, optional) – figure size for plt.subplots
kwargs (optional) – arguments for pcolormesh matplotlib function used in event plots
- Returns
list(TropCyclone), list(np.array)
- Raises
ValueError –